PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G19630.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 513aa    MW: 56268.6 Da    PI: 9.5824
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G19630.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.93.5e-31542281128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                      lp+G++F+Ptd+el+ e+L++kv+          ++++  +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+        
  OGLUM06G19630.1  54 LPAGVKFDPTDQELI-EHLEAKVQPGGeaaahplIDEFIpTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRRKiqppaaaa 145
                      799************.99*****988856665543333333766646**********.556667799******************88******* PP

              NAM  78 ...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                                      ++ +W++tgk+++v+  +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  OGLUM06G19630.1 146 ssgggggnassssaaaaavarhghqqqqqqqRSETRWHKTGKTRAVVG-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 228
                      **************************9998755789***********9.99************5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-3548138IPR003441NAC domain
PROSITE profilePS5100526.76254247IPR003441NAC domain
PfamPF023657.0E-1555228IPR003441NAC domain
SuperFamilySSF1019413.53E-35182247IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MDGVVTEDQA GGGGGGHRRL IGSRIEEHRK YMSEESCCPR CGHKIDRKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVQPGGE AAAHPLIDEF IPTIEGEDGI CYTHPEKLPG VSKDGLSRHF  120
FHRPSKAYTT GTRKRRKIQP PAAAASSGGG GGNASSSSAA AAAVARHGHQ QQQQQQRSET  180
RWHKTGKTRA VVGGGRQRGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGE AEEERDGELV  240
VSKIFYQTQP RQCAAADAAA TASAYRRTTS GRDRAAAAAA AAAAAAPMAS ANVSVAAFHG  300
GAAGIDEFSF AQFRSSFEEA GMGASSSDHQ SAMVDQRRQQ QQHDDDEHDH RRGGGGHHYV  360
GQQQSVAATF HVVSSPADPI ARLMSPPPAH QGTVMLRQPE PPYIYHHQED ERPHQPRKFD  420
GRSTSGSGLE EVIMGCTSRR SKGGETSGGK DGTEWQYPSF WPSDSQDHHG WKFHLSAQIY  480
MCKETKMILK QSKRERQKKK KERKNKGDIT RKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1494500ERQKKKK
2495501RQKKKKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126140.0CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641895.10.0PREDICTED: uncharacterized protein LOC9268992 isoform X2
TrEMBLA0A0E0AAX50.0A0A0E0AAX5_9ORYZ; Uncharacterized protein
STRINGLOC_Os06g36480.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-100NAC domain containing protein 75